Transcript: ENST00000351808.5 IFT88-001

Description

intraflagellar transport 88 homolog (Chlamydomonas) [Source:HGNC Symbol;Acc:20606]

Gene Synonyms

D13S1056E, DAF19, MGC26259, TG737, TTC10, Tg737, hTg737

Location

Chromosome 13: 21,141,208-21,265,501 forward strand.

About this transcript

This transcript has 26 exons, is annotated with 41 domains and features, is associated with 51794 variant alleles and maps to 816 oligo probes.

Gene

This transcript is a product of gene ENSG00000032742.13 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000382778.4	IFT88-201	3931	795aa	ENSP00000372228.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E7EW86 F6SRW8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000319980.6	IFT88-002	3018	833aa	ENSP00000323580.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS31944	F6SRW8 Q13099	NM_175605.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000351808.5	IFT88-001	2856	824aa	ENSP00000261632.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS31945	F6SRW8 Q13099	NM_006531.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000537103.1	IFT88-202	2716	805aa	ENSP00000437719.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H6C2 F6SRW8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000389373.3	IFT88-007	575	50aa	ENSP00000374024.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F6SRW8	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000461115.1	IFT88-003	1440	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000482172.1	IFT88-005	968	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000460931.1	IFT88-004	700	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000470695.1	IFT88-006	407	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 26, Coding exons: 25, Transcript length: 2,856 bps, Translation length: 824 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q13099

CCDS

This transcript is a member of the Human CCDS set: CCDS31945

Version

ENST00000351808.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000044074 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000351808.5 IFT88-001

Summary