Transcript: ENST00000378460.2 NUP160-001

Description

nucleoporin 160kDa [Source:HGNC Symbol;Acc:18017]

Gene Synonyms

FLJ22583, KIAA0197, NUP120

Location

Chromosome 11: 47,799,639-47,870,019 reverse strand.

About this transcript

This transcript has 36 exons, is annotated with 10 domains and features, is associated with 31961 variant alleles and maps to 1106 oligo probes.

Gene

This transcript is a product of gene ENSG00000030066.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000378460.2	NUP160-001	5376	1436aa	ENSP00000367721.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS31484	Q12769	NM_015231.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000530326.1	NUP160-003	4811	1235aa	ENSP00000433590.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G3V198	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000528071.1	NUP160-009	3910	1037aa	ENSP00000432367.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PR16	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000526870.1	NUP160-002	1537	224aa	ENSP00000431495.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q12769	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000528501.1	NUP160-010	1282	259aa	ENSP00000433964.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PSI3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000532747.1	NUP160-012	549	98aa	ENSP00000432437.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PQY5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000531016.1	NUP160-011	634	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000532773.1	NUP160-008	593	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000526569.1	NUP160-004	533	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000527126.1	NUP160-006	527	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000527750.1	NUP160-005	353	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000529863.1	NUP160-007	348	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 36, Coding exons: 36, Transcript length: 5,376 bps, Translation length: 1,436 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q12769

CCDS

This transcript is a member of the Human CCDS set: CCDS31484

Version

ENST00000378460.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000390239 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000378460.2 NUP160-001

Summary