Transcript: ENST00000430118.1 HMGB3-004

Description

high mobility group box 3 [Source:HGNC Symbol;Acc:5004]

Gene Synonyms

HMG-2a, HMG-4, HMG2A, HMG4, MGC90319

Location

About this transcript

This transcript has 3 exons, is annotated with 18 domains and features, is associated with 626 variant alleles and maps to 208 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000325307.7	HMGB3-001	3560	200aa	ENSP00000359393.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS35428	E7EQU1 E7ES08 E9PES6 O15347	NM_005342.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000448905.2	HMGB3-201	812	200aa	ENSP00000442758.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS35428	E7EQU1 E7ES08 E9PES6 O15347	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000455596.1	HMGB3-003	793	193aa	ENSP00000405601.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E7EQU1 E7ES08 E9PES6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000419110.1	HMGB3-002	707	188aa	ENSP00000410354.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E7ES08 E9PES6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000430118.1	HMGB3-004	529	153aa	ENSP00000417027.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PES6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 529 bps, Translation length: 153 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000430118.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000060870 (version 1)