Transcript: ENST00000592232.1 SLC7A9-004

Description

solute carrier family 7 (amino acid transporter light chain, bo,+ system), member 9 [Source:HGNC Symbol;Acc:11067]

Gene Synonyms

BAT1, CSNU3

Location

About this transcript

This transcript has 8 exons, is associated with 18175 variant alleles and maps to 275 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000023064.4	SLC7A9-001	1761	487aa	ENSP00000023064.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS12425	K7EIF5 P82251	NM_014270.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000590341.1	SLC7A9-006	1752	487aa	ENSP00000464822.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS12425	K7EIF5 P82251	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000587772.1	SLC7A9-002	1568	487aa	ENSP00000468439.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS12425	K7EIF5 P82251	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000590465.1	SLC7A9-003	1998	39aa	ENSP00000468076.1	Nonsense mediated decay		K7EKD0	-	-
ENST00000592232.1	SLC7A9-004	1030	39aa	ENSP00000465563.1	Nonsense mediated decay		K7EKD0	-	-
ENST00000589659.1	SLC7A9-005	886	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 8, Coding exons: 2, Transcript length: 1,030 bps, Translation length: 39 residues

Version

ENST00000592232.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000450586 (version 1)