Transcript: ENST00000327097.4 MARCO-001

Description

macrophage receptor with collagenous structure [Source:HGNC Symbol;Acc:6895]

Gene Synonyms

SCARA2

Location

About this transcript

This transcript has 17 exons, is annotated with 23 domains and features, is associated with 25440 variant alleles and maps to 563 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000541757.1	MARCO-201	1843	442aa	ENSP00000441769.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DW79 C9JKT8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000327097.4	MARCO-001	1838	520aa	ENSP00000318916.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2124	B4DLJ6 B4DW79 C9JKT8 Q4ZG40 Q9UEW3	NM_006770.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000412481.1	MARCO-003	569	63aa	ENSP00000409192.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JKT8	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000494979.1	MARCO-004	556	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 17, Coding exons: 17, Transcript length: 1,838 bps, Translation length: 520 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9UEW3

CCDS

This transcript is a member of the Human CCDS set: CCDS2124

Version

ENST00000327097.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000254190 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.