Transcript: ENST00000509778.1 XYLT2-004

Description

xylosyltransferase II [Source:HGNC Symbol;Acc:15517]

Gene Synonyms

PXYLT2, XT-II, XT2, xylT-II

Location

Chromosome 17: 48,423,492-48,431,035 forward strand.

About this transcript

This transcript has 2 exons, is annotated with 4 domains and features, is associated with 3297 variant alleles and maps to 75 oligo probes.

Gene

This transcript is a product of gene ENSG00000015532.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000017003.2	XYLT2-001	3507	865aa	ENSP00000017003.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11563	Q9H1B5	NM_022167.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000507602.1	XYLT2-002	2107	676aa	ENSP00000426501.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DT06	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000574840.1	XYLT2-007	901	46aa	ENSP00000460517.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		I3L3K2	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000509778.1	XYLT2-004	145	45aa	ENSP00000425511.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RCT0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000376550.3	XYLT2-003	3267	639aa	ENSP00000365733.3	Nonsense mediated decay		Q9H1B5	-	-
ENST00000511654.1	XYLT2-005	587	117aa	ENSP00000428350.1	Nonsense mediated decay		H0YB00	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000571021.1	XYLT2-006	2174	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 2, Transcript length: 145 bps, Translation length: 45 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000509778.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000367049 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000509778.1 XYLT2-004

Summary