Transcript: ENST00000546380.1 NR1H4-008

Description

nuclear receptor subfamily 1, group H, member 4 [Source:HGNC Symbol;Acc:7967]

Gene Synonyms

BAR, FXR, HRR-1, HRR1, RIP14

Location

Chromosome 12: 100,867,733-100,899,544 forward strand.

About this transcript

This transcript has 4 exons, is associated with 12479 variant alleles and maps to 121 oligo probes.

Gene

This transcript is a product of gene ENSG00000012504.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000548884.1	NR1H4-001	2884	472aa	ENSP00000448506.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9078	B6ZGS9 Q96RI1	NM_005123.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000392986.3	NR1H4-003	1778	476aa	ENSP00000376712.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS55873	F1DAL1 Q96RI1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000549996.1	NR1H4-002	1633	425aa	ENSP00000448978.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS55874	Q96RI1	NM_001206978.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000188403.7	NR1H4-005	1630	482aa	ENSP00000188403.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS55875	Q96RI1	NM_001206993.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000551379.1	NR1H4-006	1489	486aa	ENSP00000447149.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS55876	B7Z423 Q96RI1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000546380.1	NR1H4-008	565	45aa	ENSP00000446760.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8W1M1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000551184.1	NR1H4-007	294	34aa	ENSP00000446861.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000321046.5	NR1H4-004	1779	270aa	ENSP00000315442.5	Nonsense mediated decay		G8JLB0	-	-
ENST00000548621.1	NR1H4-009	496	57aa	ENSP00000446584.1	Nonsense mediated decay		F8W656	-	-

Summary

Statistics

Exons: 4, Coding exons: 2, Transcript length: 565 bps, Translation length: 45 residues

Version

ENST00000546380.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000409138 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000546380.1 NR1H4-008

Summary