Transcript: ENST00000011653.4 CD4-001

Description

CD4 molecule [Source:HGNC Symbol;Acc:1678]

Gene Synonyms

CD4mut, CD4receptor

Location

Chromosome 12: 6,898,638-6,929,974 forward strand.

About this transcript

This transcript has 10 exons, is annotated with 33 domains and features, is associated with 16397 variant alleles and maps to 589 oligo probes.

Gene

This transcript is a product of gene ENSG00000010610.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000011653.4	CD4-001	3114	458aa	ENSP00000011653.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8562	B4DT49 F5GYA9 P01730 Q13969 Q6LCP8	NM_001195017.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000541982.1	CD4-005	1187	148aa	ENSP00000445167.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H480	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000539492.1	CD4-007	579	45aa	ENSP00000440720.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5GYA9	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000538827.1	CD4-004	985	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000536610.1	CD4-012	608	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000536563.1	CD4-011	593	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000535466.1	CD4-008	588	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000535707.1	CD4-013	577	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000536590.1	CD4-009	561	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000437800.2	CD4-003	2117	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000544344.1	CD4-006	1056	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000543755.1	CD4-010	494	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 10, Coding exons: 9, Transcript length: 3,114 bps, Translation length: 458 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P01730

CCDS

This transcript is a member of the Human CCDS set: CCDS8562

Version

ENST00000011653.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000399978 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000011653.4 CD4-001

Summary