Transcript: ENST00000539885.1 NCAPD2-007

Description

non-SMC condensin I complex, subunit D2 [Source:HGNC Symbol;Acc:24305]

Gene Synonyms

CAP-D2, CAPD2, CNAP1, KIAA0159, hCAP-D2

Location

Chromosome 12: 6,638,426-6,639,896 forward strand.

About this transcript

This transcript has 3 exons, is associated with 679 variant alleles and maps to 256 oligo probes.

Gene

This transcript is a product of gene ENSG00000010292.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000315579.5	NCAPD2-001	5548	1401aa	ENSP00000325017.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8548	F5GZK7 Q15021	NM_014865.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000545962.1	NCAPD2-201	4290	1356aa	ENSP00000444417.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5GZJ1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000382457.4	NCAPD2-002	2844	919aa	ENSP00000371895.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E7EN77	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000539714.1	NCAPD2-005	533	118aa	ENSP00000444377.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5GZK7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000539084.1	NCAPD2-003	4290	81aa	ENSP00000438495.1	Nonsense mediated decay		F5H431	-	-
ENST00000542492.1	NCAPD2-014	1052	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000536538.1	NCAPD2-009	765	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000536090.1	NCAPD2-008	654	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000541399.1	NCAPD2-010	584	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000539885.1	NCAPD2-007	558	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000535804.1	NCAPD2-006	537	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000542472.1	NCAPD2-012	444	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000538600.1	NCAPD2-013	290	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000545732.1	NCAPD2-011	543	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 558 bps,

Version

ENST00000539885.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000399976 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000539885.1 NCAPD2-007

Summary