Transcript: ENST00000340825.3 ARHGAP44-001

Description

Rho GTPase activating protein 44 [Source:HGNC Symbol;Acc:29096]

Gene Synonyms

KIAA0672, NPC-A-10, RICH-2, RICH2

Location

Chromosome 17: 12,692,856-12,894,960 forward strand.

About this transcript

This transcript has 20 exons, is annotated with 20 domains and features, is associated with 89720 variant alleles and maps to 555 oligo probes.

Gene

This transcript is a product of gene ENSG00000006740.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000379672.5	ARHGAP44-011	4228	818aa	ENSP00000368994.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45616	J3QQU7 Q17R89	NM_014859.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000340825.3	ARHGAP44-001	4211	812aa	ENSP00000342566.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A6NCP5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000262444.9	ARHGAP44-009	3001	774aa	ENSP00000262444.9	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E7ERK8 J3QQU7 Q8TBK1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000583608.1	ARHGAP44-012	730	191aa	ENSP00000463905.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3QQU7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000581437.1	ARHGAP44-006	629	182aa	ENSP00000465509.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000580768.1	ARHGAP44-002	4143	178aa	ENSP00000462141.1	Nonsense mediated decay		J3KRS3	-	-
ENST00000544416.2	ARHGAP44-010	2533	591aa	ENSP00000437542.2	Nonsense mediated decay		F5H6L3	-	-
ENST00000578087.1	ARHGAP44-005	559	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000584974.1	ARHGAP44-013	4428	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000578442.1	ARHGAP44-003	1119	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000538915.2	ARHGAP44-007	666	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 20, Coding exons: 20, Transcript length: 4,211 bps, Translation length: 812 residues

Version

ENST00000340825.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000129945 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000340825.3 ARHGAP44-001

Summary