Transcript: ENST00000571834.1 YBX2-002

Description

Y box binding protein 2 [Source:HGNC Symbol;Acc:17948]

Gene Synonyms

CONTRIN, CSDA3, DBPC, MSY2

Location

About this transcript

This transcript has 8 exons, is associated with 2656 variant alleles and maps to 317 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000007699.5	YBX2-001	1590	364aa	ENSP00000007699.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11098	Q9Y2T7	NM_015982.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000571464.1	YBX2-007	640	164aa	ENSP00000459587.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000570627.1	YBX2-005	653	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000571485.1	YBX2-003	4553	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000571834.1	YBX2-002	2195	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000571127.1	YBX2-004	791	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000570720.1	YBX2-006	606	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 8, Coding exons: 0, Transcript length: 2,195 bps,

Version

ENST00000571834.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000440186 (version 1)