Transcript: ENST00000592226.1 ITGA2B-004

Description

integrin, alpha 2b (platelet glycoprotein IIb of IIb/IIIa complex, antigen CD41) [Source:HGNC Symbol;Acc:6138]

Gene Synonyms

BDPLT16, BDPLT2, CD41, CD41B, GP2B, GPIIb, GT, GTA, HPA3, ITGAB

Location

Chromosome 17: 42,457,425-42,462,570 reverse strand.

About this transcript

This transcript has 10 exons, is associated with 2686 variant alleles and maps to 292 oligo probes.

Gene

This transcript is a product of gene ENSG00000005961.13 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000262407.5	ITGA2B-001	3333	1039aa	ENSP00000262407.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS32665	F1C626 I6XCH0 P08514 Q6LDK5	NM_000419.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000353281.4	ITGA2B-201	3232	1005aa	ENSP00000340536.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F1C626 I6XCH0 P08514	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000377068.3	ITGA2B-202	1212	219aa	ENSP00000366268.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B7Z8B0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000587295.1	ITGA2B-011	496	104aa	ENSP00000467269.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000588098.1	ITGA2B-012	281	32aa	ENSP00000465534.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000592462.1	ITGA2B-003	3189	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000592226.1	ITGA2B-004	1170	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000589645.1	ITGA2B-009	579	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000591990.1	ITGA2B-007	565	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000592944.1	ITGA2B-005	563	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000592253.1	ITGA2B-006	462	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000592075.1	ITGA2B-008	461	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 10, Coding exons: 0, Transcript length: 1,170 bps,

Version

ENST00000592226.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000457790 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000592226.1 ITGA2B-004

Summary