Transcript: ENST00000423059.4 THSD7A-001

Description

thrombospondin, type I, domain containing 7A [Source:HGNC Symbol;Acc:22207]

Gene Synonyms

KIAA0960

Location

About this transcript

This transcript has 28 exons, is annotated with 70 domains and features, is associated with 230064 variant alleles and maps to 1121 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000423059.4	THSD7A-001	10663	1657aa	ENSP00000406482.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47543	Q9UPZ6	NM_015204.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000480061.1	THSD7A-002	567	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000497575.1	THSD7A-003	529	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000408005.2	THSD7A-004	1684	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 28, Coding exons: 28, Transcript length: 10,663 bps, Translation length: 1,657 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9UPZ6

CCDS

This transcript is a member of the Human CCDS set: CCDS47543

Version

ENST00000423059.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000325944 (version 4)

Annotation Attributes

dotter confirmed [Definitions]

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.