Transcript: ENST00000347869.3 RBM5-001

Description

RNA binding motif protein 5 [Source:HGNC Symbol;Acc:9902]

Gene Synonyms

G15, H37, LUCA15, RMB5

Location

Chromosome 3: 50,126,341-50,156,454 forward strand.

About this transcript

This transcript has 25 exons, is annotated with 34 domains and features, is associated with 13184 variant alleles and maps to 1181 oligo probes.

Gene

This transcript is a product of gene ENSG00000003756.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000347869.3	RBM5-001	3188	815aa	ENSP00000343054.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2810	C9J9P7 C9JFQ5 C9JR02 P52756	NM_005778.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000469838.1	RBM5-003	2716	143aa	ENSP00000419534.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J9P7 C9JFQ5 C9JR02 E1CJT4 P52756	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000437500.1	RBM5-008	582	105aa	ENSP00000394622.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JR02	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000404526.2	RBM5-012	580	138aa	ENSP00000384872.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8W910	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000441305.1	RBM5-007	569	137aa	ENSP00000390711.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J9P7 C9JFQ5 C9JR02	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000417905.1	RBM5-009	427	120aa	ENSP00000406119.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J9P7 C9JR02	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000395174.2	RBM5-014	938	56aa	ENSP00000378603.2	Nonsense mediated decay		H7BYM9	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000438369.1	RBM5-011	560	81aa	ENSP00000414218.1	Nonsense mediated decay		F8WE23	-	-
ENST00000441812.2	RBM5-029	583	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000474470.1	RBM5-020	434	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000464087.2	RBM5-004	5616	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000479275.1	RBM5-024	1683	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000496179.1	RBM5-005	1406	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000475128.1	RBM5-021	1371	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000492472.1	RBM5-010	902	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000464988.1	RBM5-025	877	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000474818.1	RBM5-018	832	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000471995.1	RBM5-016	762	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000475590.1	RBM5-026	704	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000489437.1	RBM5-019	625	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000494360.1	RBM5-017	585	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000492430.1	RBM5-023	580	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000462025.1	RBM5-015	573	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000433556.2	RBM5-013	567	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000493993.1	RBM5-022	476	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000461242.1	RBM5-027	275	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 25, Coding exons: 24, Transcript length: 3,188 bps, Translation length: 815 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P52756

CCDS

This transcript is a member of the Human CCDS set: CCDS2810

Version

ENST00000347869.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000345797 (version 3)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000347869.3 RBM5-001

Summary