Transcript: ENST00000001146.2 CYP26B1-001

Description

cytochrome P450, family 26, subfamily B, polypeptide 1 [Source:HGNC Symbol;Acc:20581]

Gene Synonyms

CYP26A2, P450RAI-2, P450RAI2, RHFCA

Location

About this transcript

This transcript has 6 exons, is annotated with 16 domains and features, is associated with 10177 variant alleles and maps to 427 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000001146.2	CYP26B1-001	4732	512aa	ENSP00000001146.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1919	E7ER08 Q9NR63	NM_019885.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000412253.1	CYP26B1-002	4025	321aa	ENSP00000401465.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E7ER08	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000546307.1	CYP26B1-201	1346	437aa	ENSP00000443304.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS62934	E5RHM2 E7ER08 Q9NR63	NM_001277742.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000474509.1	CYP26B1-003	574	182aa	ENSP00000430888.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RHM2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000461519.1	CYP26B1-004	567	172aa	ENSP00000430871.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RHN4	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 4,732 bps, Translation length: 512 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9NR63

CCDS

This transcript is a member of the Human CCDS set: CCDS1919

Version

ENST00000001146.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000251969 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.