Transcript: ENST00000374399.4 NIPAL3-007

Description

NIPA-like domain containing 3 [Source:HGNC Symbol;Acc:25233]

Gene Synonyms

DJ462O23.2, NPAL3

Location

Chromosome 1: 24,742,284-24,795,797 forward strand.

About this transcript

This transcript has 12 exons, is annotated with 16 domains and features, is associated with 20719 variant alleles and maps to 375 oligo probes.

Gene

This transcript is a product of gene ENSG00000001461.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000003912.3	NIPAL3-001	5481	324aa	ENSP00000003912.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q6P499	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000432012.1	NIPAL3-004	2714	134aa	ENSP00000392170.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q7Z354	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000358028.4	NIPAL3-002	1757	226aa	ENSP00000350722.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q6P499	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000374399.4	NIPAL3-007	1711	406aa	ENSP00000363520.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS30631	Q6P499	NM_020448.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000339255.2	NIPAL3-005	1676	368aa	ENSP00000343549.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A6NN97	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000428131.1	NIPAL3-201	681	226aa	ENSP00000406509.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q6P499	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000488155.1	NIPAL3-006	931	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000475663.2	NIPAL3-003	694	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 12, Coding exons: 11, Transcript length: 1,711 bps, Translation length: 406 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q6P499

CCDS

This transcript is a member of the Human CCDS set: CCDS30631

Version

ENST00000374399.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000276996 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000374399.4 NIPAL3-007

Summary