Transcript: ENST00000415913.1 IDH1-006

Description

isocitrate dehydrogenase 1 (NADP+), soluble [Source:HGNC Symbol;Acc:5382]

Gene Synonyms

HEL-S-26, IDCD, IDH, IDP, IDPC, PICD

Location

Chromosome 2: 209,100,989-209,119,046 reverse strand.

About this transcript

This transcript has 10 exons, is annotated with 7 domains and features, is associated with 9460 variant alleles and maps to 551 oligo probes.

Gene

This transcript is a product of gene ENSG00000138413.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000415913.1	IDH1-006	2441	414aa	ENSP00000390265.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2381	B4DXS4 C9J4N6 C9JJE5 C9JLU6 O75874 Q0QER2 Q6FHQ6	NM_001282387.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000345146.2	IDH1-001	2382	414aa	ENSP00000260985.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2381	B4DXS4 C9J4N6 C9JJE5 C9JLU6 O75874 Q0QER2 Q6FHQ6	NM_005896.2	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000446179.1	IDH1-004	2298	414aa	ENSP00000410513.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2381	B4DXS4 C9J4N6 C9JJE5 C9JLU6 O75874 Q0QER2 Q6FHQ6	NM_001282386.1	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000415282.1	IDH1-009	942	157aa	ENSP00000391075.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J4N6 C9JJE5 C9JLU6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000417583.1	IDH1-008	702	73aa	ENSP00000409045.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JJE5 C9JLU6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000451391.1	IDH1-007	563	62aa	ENSP00000396787.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JJE5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000462386.1	IDH1-003	1614	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000484575.1	IDH1-012	1044	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000481557.1	IDH1-010	556	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 10, Coding exons: 8, Transcript length: 2,441 bps, Translation length: 414 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O75874

CCDS

This transcript is a member of the Human CCDS set: CCDS2381

Version

ENST00000415913.1

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000336672 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000415913.1 IDH1-006

Summary