Transcript: ENST00000446179.1 IDH1-004

Description

isocitrate dehydrogenase 1 (NADP+), soluble [Source:HGNC Symbol;Acc:5382]

Gene Synonyms

HEL-S-26, IDCD, IDH, IDP, IDPC, PICD

Location

Chromosome 2: 209,100,956-209,119,182 reverse strand.

About this transcript

This transcript has 10 exons, is annotated with 7 domains and features, is associated with 9546 variant alleles and maps to 508 oligo probes.

Gene

This transcript is a product of gene ENSG00000138413.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000415913.1	IDH1-006	2441	414aa	ENSP00000390265.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2381	B4DXS4 C9J4N6 C9JJE5 C9JLU6 O75874 Q0QER2 Q6FHQ6	NM_001282387.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000345146.2	IDH1-001	2382	414aa	ENSP00000260985.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2381	B4DXS4 C9J4N6 C9JJE5 C9JLU6 O75874 Q0QER2 Q6FHQ6	NM_005896.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000446179.1	IDH1-004	2298	414aa	ENSP00000410513.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2381	B4DXS4 C9J4N6 C9JJE5 C9JLU6 O75874 Q0QER2 Q6FHQ6	NM_001282386.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000415282.1	IDH1-009	942	157aa	ENSP00000391075.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J4N6 C9JJE5 C9JLU6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000417583.1	IDH1-008	702	73aa	ENSP00000409045.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JJE5 C9JLU6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000451391.1	IDH1-007	563	62aa	ENSP00000396787.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JJE5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000462386.1	IDH1-003	1614	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000484575.1	IDH1-012	1044	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000481557.1	IDH1-010	556	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 10, Coding exons: 8, Transcript length: 2,298 bps, Translation length: 414 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O75874

CCDS

This transcript is a member of the Human CCDS set: CCDS2381

Version

ENST00000446179.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000336670 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000446179.1 IDH1-004

Summary