Transcript: ENST00000354822.5 NKX2-1-002
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Description
NK2 homeobox 1 [Source:HGNC Symbol;Acc:11825 ]
Gene Synonyms
BCH, BHC, NK-2, NKX2.1, NKX2A, TEBP, TITF1, TTF-1, TTF1
Show/hide columns (1 hidden)
ENST00000354822.5 NKX2-1-002 2186 401aa Gene/transcipt that contains an open reading frame (ORF). Protein coding
CCDS41945 P43699 Q13306 NM_001079668.2 A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.html Ensembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes. GENCODE Basic, ENST00000518149.1 NKX2-1-004 2583 371aa Gene/transcipt that contains an open reading frame (ORF). Protein coding
CCDS9659 P43699 - A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes. GENCODE Basic, ENST00000498187.2 NKX2-1-001 2330 371aa Gene/transcipt that contains an open reading frame (ORF). Protein coding
CCDS9659 P43699 NM_003317.3 A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes. GENCODE Basic, ENST00000522719.2 NKX2-1-003 1417 371aa Gene/transcipt that contains an open reading frame (ORF). Protein coding
CCDS9659 P43699 - A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes. GENCODE Basic, ENST00000546983.1 NKX2-1-005 653 34aa Gene/transcipt that contains an open reading frame (ORF). Protein coding
F8VVG2 - 3' truncation in transcript evidence prevents annotation of the end of the CDS. CDS 3' incomplete,
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Statistics
Exons: 3, Coding exons: 3, Transcript length: 2,186 bps, Translation length: 401 residues
Uniprot
This transcript corresponds to the following Uniprot identifiers: P43699
CCDS
This transcript is a member of the Human CCDS set: CCDS41945
Annotation Method
Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article .
Alternative transcripts
This transcript corresponds to the following database identifiers:
Transcript having exact match between ENSEMBL and HAVANA:
GENCODE basic gene
This transcript is a member of the gene set.
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