Transcript: ENST00000316448.5 CALR-001
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Description
calreticulin [Source:HGNC Symbol;Acc:1455 ]
Gene Synonyms
CRT, CRTC, FLJ26680, HEL-S-99n, RO, SSA, cC1qR
Show/hide columns (1 hidden)
ENST00000316448.5 CALR-001 1903 417aa Gene/transcipt that contains an open reading frame (ORF). Protein coding
CCDS12288 B4E2Y9 P27797 NM_004343.3 A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.html Ensembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes. GENCODE Basic, ENST00000586760.1 CALR-006 913 163aa Gene/transcipt that contains an open reading frame (ORF). Protein coding
- - 5' truncation in transcript evidence prevents annotation of the start of the CDS. CDS 5' incomplete, ENST00000588454.1 CALR-008 776 247aa Gene/transcipt that contains an open reading frame (ORF). Protein coding
K7EJB9 - 3' truncation in transcript evidence prevents annotation of the end of the CDS. CDS 3' incomplete, ENST00000586967.1 CALR-007 394 13aa - - 5' truncation in transcript evidence prevents annotation of the start of the CDS. CDS 5' incomplete, ENST00000587486.2 CALR-003 957 No protein An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene. Retained intron
- - - ENST00000590325.1 CALR-004 781 No protein An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene. Retained intron
- - - ENST00000586803.1 CALR-005 667 No protein An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene. Retained intron
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Statistics
Exons: 9, Coding exons: 9, Transcript length: 1,903 bps, Translation length: 417 residues
Uniprot
This transcript corresponds to the following Uniprot identifiers: P27797
CCDS
This transcript is a member of the Human CCDS set: CCDS12288
Annotation Method
Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article .
Alternative transcripts
This transcript corresponds to the following database identifiers:
Transcript having exact match between ENSEMBL and HAVANA:
GENCODE basic gene
This transcript is a member of the gene set.
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