Transcript: ENST00000571680.1 ITGB3-004

Description

integrin, beta 3 (platelet glycoprotein IIIa, antigen CD61) [Source:HGNC Symbol;Acc:6156]

Gene Synonyms

BDPLT16, BDPLT2, CD61, GP3A, GPIIIa, GT

Location

About this transcript

This transcript has 9 exons, is annotated with 21 domains and features, is associated with 15323 variant alleles and maps to 342 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000559488.1	ITGB3-001	3995	788aa	ENSP00000452786.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11511	F1C630 F1C632 F1C634 F2X0V0 P05106	NM_000212.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000435993.2	ITGB3-201	2785	751aa	ENSP00000407801.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DTY9 F1C630 F1C632 F1C634 F2X0V0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000571680.1	ITGB3-004	1668	443aa	ENSP00000461626.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		I3L4X8 Q16157	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000573377.1	ITGB3-005	408	35aa	ENSP00000465586.1	Nonsense mediated decay		Q16157	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 9, Coding exons: 9, Transcript length: 1,668 bps, Translation length: 443 residues

Version

ENST00000571680.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000441067 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.