Transcript: ENST00000559488.1 ITGB3-001

Description

integrin, beta 3 (platelet glycoprotein IIIa, antigen CD61) [Source:HGNC Symbol;Acc:6156]

Gene Synonyms

BDPLT16, BDPLT2, CD61, GP3A, GPIIIa, GT

Location

About this transcript

This transcript has 15 exons, is annotated with 42 domains and features, is associated with 23577 variant alleles and maps to 784 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000559488.1	ITGB3-001	3995	788aa	ENSP00000452786.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11511	F1C630 F1C632 F1C634 F2X0V0 P05106	NM_000212.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000435993.2	ITGB3-201	2785	751aa	ENSP00000407801.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DTY9 F1C630 F1C632 F1C634 F2X0V0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000571680.1	ITGB3-004	1668	443aa	ENSP00000461626.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		I3L4X8 Q16157	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000573377.1	ITGB3-005	408	35aa	ENSP00000465586.1	Nonsense mediated decay		Q16157	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 15, Coding exons: 15, Transcript length: 3,995 bps, Translation length: 788 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P05106

CCDS

This transcript is a member of the Human CCDS set: CCDS11511

Version

ENST00000559488.1

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000416111 (version 3)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.