Transcript: ENST00000465608.1 HOGA1-002

Description

4-hydroxy-2-oxoglutarate aldolase 1 [Source:HGNC Symbol;Acc:25155]

Gene Synonyms

C10orf65, DHDPS2, DHDPSL, FLJ37472, HP3, NPL2

Location

About this transcript

This transcript has 3 exons, is associated with 7685 variant alleles and maps to 214 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000370646.4	HOGA1-003	2488	327aa	ENSP00000359680.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7467	Q86XE5	NM_138413.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000370647.4	HOGA1-001	1999	164aa	ENSP00000359681.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS44469	Q86XE5	NM_001134670.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000370642.4	HOGA1-004	384	85aa	ENSP00000359676.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000465608.1	HOGA1-002	2581	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 2,581 bps,

Version

ENST00000465608.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000049725 (version 2)