Transcript: ENST00000322272.7 TNFSF12-003

Description

tumor necrosis factor (ligand) superfamily, member 12 [Source:HGNC Symbol;Acc:11927]

Gene Synonyms

APO3L, DR3LG, TWE-PRIL, TWEAK

Location

About this transcript

This transcript has 8 exons, is annotated with 6 domains and features, is associated with 4253 variant alleles and maps to 530 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000557233.1	TNFSF12-201	1768	330aa	ENSP00000451451.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11108	K7EJ28 O43508 Q6U6I7	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000293825.6	TNFSF12-001	1553	249aa	ENSP00000293825.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11109	O43508 Q4ACW9	NM_003809.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000322272.7	TNFSF12-003	1625	134aa	ENSP00000314636.7	Nonsense mediated decay		C0H5Y4	-	-
ENST00000462811.1	TNFSF12-005	805	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000462619.1	TNFSF12-004	522	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 8, Coding exons: 6, Transcript length: 1,625 bps, Translation length: 134 residues

Version

ENST00000322272.7

Type

Nonsense mediated decay

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000268803 (version 2)