Transcript: ENST00000475116.1 ERCC6-003

Description

excision repair cross-complementing rodent repair deficiency, complementation group 6 [Source:HGNC Symbol;Acc:3438]

Gene Synonyms

ARMD5, CKN2, COFS, COFS1, CSB, RAD26, UVSS1

Location

Chromosome 10: 50,691,414-50,714,045 reverse strand.

About this transcript

This transcript has 3 exons, is associated with 8865 variant alleles and maps to 95 oligo probes.

Gene

This transcript is a product of gene ENSG00000225830.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000355832.5	ERCC6-001	8008	1493aa	ENSP00000348089.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7229	D6R9X7 F5H493 Q03468	NM_000124.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000542458.1	ERCC6-201	2932	863aa	ENSP00000445134.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H493	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000462247.1	ERCC6-005	660	179aa	ENSP00000422827.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6R9X7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000465653.1	ERCC6-002	733	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000475116.1	ERCC6-003	424	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000479652.1	ERCC6-004	418	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 424 bps,

Version

ENST00000475116.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000047992 (version 1)

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Transcript: ENST00000475116.1 ERCC6-003

Summary