Transcript: ENST00000400282.2 MIR17HG-001

Description

miR-17-92 cluster host gene (non-protein coding) [Source:HGNC Symbol;Acc:23564]

Gene Synonyms

C13orf25, FGLDS2, FLJ14178, LINC00048, MIHG1, MIR17-5p, MIR18, MIR20, MIR91, MIR92-1, MIRH1, MIRHG1, MIRN17, MIRN18, MIRN18A, MIRN19A, MIRN19B1, MIRN20, MIRN20A, MIRN91, MIRN92-1, MIRN92A-1, MIRN92A1, NCRNA00048, hsa-mir-17, hsa-mir-18, hsa-mir-18a, hsa-mir-19a, hsa-mir-20, hsa-mir-20a, miR-17, miR-17-92, miR-18, miR-19a, miR-19b-1, miR-20, miR17-3p, miRNA17, miRNA18A, miRNA19A, miRNA19B1, miRNA20A, miRNA91, miRNA92-1

Location

Chromosome 13: 92,000,074-92,006,833 forward strand.

About this transcript

This transcript has 4 exons, is associated with 3950 variant alleles and maps to 297 oligo probes.

Gene

This transcript is a product of gene ENSG00000215417.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq	Flags
ENST00000582141.1	MIR17HG-002	2845	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENST00000581816.1	MIR17HG-003	2032	No protein	-	lincRNA	-	-
ENST00000400282.2	MIR17HG-001	931	No protein	-	lincRNA	-	-
ENST00000362310.2	MIR17HG-202	92	No protein	-	A small RNA (~22bp) that silences the expression of target mRNA.miRNA	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000384829.1	MIR17HG-203	87	No protein	-	A small RNA (~22bp) that silences the expression of target mRNA.miRNA	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000385012.1	MIR17HG-205	84	No protein	-	A small RNA (~22bp) that silences the expression of target mRNA.miRNA	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000384878.1	MIR17HG-204	82	No protein	-	A small RNA (~22bp) that silences the expression of target mRNA.miRNA	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000385233.2	MIR17HG-206	80	No protein	-	A small RNA (~22bp) that silences the expression of target mRNA.miRNA	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000362279.1	MIR17HG-201	71	No protein	-	A small RNA (~22bp) that silences the expression of target mRNA.miRNA	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 931 bps,

Version

ENST00000400282.2

Type

LincRNA

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000045448 (version 3)

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Transcript: ENST00000400282.2 MIR17HG-001

Summary