Transcript: ENST00000548735.1 KRT6A-005

Description

keratin 6A [Source:HGNC Symbol;Acc:6443]

Gene Synonyms

CK6A, CK6C, CK6D, K6A, K6C, K6D, KRT6C, KRT6D

Location

About this transcript

This transcript has 2 exons, is associated with 431 variant alleles and maps to 106 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000330722.6	KRT6A-001	2310	564aa	ENSP00000369317.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS41786	P02538	NM_005554.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000549898.1	KRT6A-002	814	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000549754.1	KRT6A-003	715	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000549600.1	KRT6A-004	499	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000548735.1	KRT6A-005	227	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 227 bps,

Version

ENST00000548735.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000405308 (version 1)