Transcript: ENST00000375612.4 XAGE1B-002

Description

X antigen family, member 1B [Source:HGNC Symbol;Acc:25400]

Gene Synonyms

CT12.1, CT12.1A, CT12.1B, CT12.1C, CT12.1D, CT12.1E, CT12.1b, CTP9, GAGED2, XAGE-1, XAGE1

Location

Chromosome X: 52,239,019-52,243,954 forward strand.

About this transcript

This transcript has 4 exons, is associated with 331 variant alleles and maps to 1311 oligo probes.

Gene

This transcript is a product of gene ENSG00000204382.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000375616.1	XAGE1B-001	614	81aa	ENSP00000364766.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS48117	Q9HD64	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000437949.2	XAGE1B-202	622	146aa	ENSP00000388178.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q9HD64	NM_001097594.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000375613.3	XAGE1B-003	474	69aa	ENSP00000364763.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS48119	Q9HD64	NM_001097596.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000518075.1	XAGE1B-006	472	81aa	ENSP00000430130.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS48117	Q9HD64	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000399805.2	XAGE1B-201	350	69aa	ENSP00000382704.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS48119	Q9HD64	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000375612.4	XAGE1B-002	733	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000519579.1	XAGE1B-005	533	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000494039.1	XAGE1B-004	359	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 733 bps,

Version

ENST00000375612.4

Type

Processed transcript

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000056633 (version 4)

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Transcript: ENST00000375612.4 XAGE1B-002

Summary