Transcript: ENST00000529898.1 CTR9-005

Description

CTR9, Paf1/RNA polymerase II complex component [Source:HGNC Symbol;Acc:16850]

Gene Synonyms

KIAA0155, SH2BP1, TSBP, p150, p150TSP

Location

About this transcript

This transcript has 3 exons, is associated with 913 variant alleles and maps to 76 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000361367.2	CTR9-001	4586	1173aa	ENSP00000355013.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7805	Q6PD62	NM_014633.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000524523.1	CTR9-002	902	300aa	ENSP00000431458.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YCE8	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000529355.1	CTR9-004	1146	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000529898.1	CTR9-005	594	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000526874.1	CTR9-003	565	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 594 bps,

Version

ENST00000529898.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000386219 (version 1)