Description
atlastin GTPase 1 [Source:HGNC Symbol;Acc:11231]
Gene Synonyms
AD-FSP, ATL1-beta, FSP1, GBP3, HSN1D, SPG3, SPG3A, atlastin1
Location
Chromosome 14: 51,027,005-51,057,766 forward strand.
About this transcript
This transcript has 3 exons, is annotated with 5 domains and features, is associated with 12100 variant alleles and maps to 160 oligo probes.
Gene
This transcript is a product of gene ENSG00000198513.7 Show transcript tableHide transcript table
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000358385.6 | ATL1-001 | 2647 | 558aa | ENSP00000351155.6 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS9700 | G3V321 G3V334 G3V4Y8 G3V5T4 Q8WXF7 | NM_015915.4 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000441560.2 | ATL1-002 | 2853 | 553aa | ENSP00000413675.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS32077 | G3V321 G3V334 G3V4Y8 G3V5T4 Q8WXF7 | NM_001127713.1 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000357032.3 | ATL1-202 | 2643 | 558aa | ENSP00000349534.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F8WD04 G3V321 G3V334 G3V4Y8 G3V5T4 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000354525.4 | ATL1-201 | 2628 | 553aa | ENSP00000346522.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS32077 | G3V321 G3V334 G3V4Y8 G3V5T4 Q8WXF7 | NM_181598.3 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000555960.1 | ATL1-005 | 620 | 99aa | ENSP00000452506.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | G3V321 G3V5T4 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000557735.1 | ATL1-012 | 570 | 47aa | ENSP00000451015.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | G3V334 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000554886.1 | ATL1-008 | 545 | 75aa | ENSP00000452074.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | G3V4Y8 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000553509.1 | ATL1-006 | 527 | 29aa | ENSP00000450989.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | G3V321 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000556067.1 | ATL1-011 | 550 | 105aa | ENSP00000451100.1 | Nonsense mediated decay | H0YJA7 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000555266.1 | ATL1-009 | 383 | 52aa | ENSP00000450897.1 | Nonsense mediated decay | H0YJ65 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000556478.2 | ATL1-003 | 644 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000553746.1 | ATL1-007 | 370 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |