Transcript: ENST00000552408.1 PRIM1-006

Description

primase, DNA, polypeptide 1 (49kDa) [Source:HGNC Symbol;Acc:9369]

Gene Synonyms

p49

Location

Chromosome 12: 57,140,740-57,145,599 reverse strand.

About this transcript

This transcript has 3 exons, is associated with 1930 variant alleles and maps to 113 oligo probes.

Gene

This transcript is a product of gene ENSG00000198056.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000338193.6	PRIM1-002	1393	420aa	ENSP00000350491.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS44926	P49642	NM_000946.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000550770.1	PRIM1-007	1008	327aa	ENSP00000450185.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8VNY2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000549549.1	PRIM1-008	456	152aa	ENSP00000449806.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YIP2	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000552590.2	PRIM1-001	1459	185aa	ENSP00000448178.1	Nonsense mediated decay		F8VSB2	-	-
ENST00000552408.1	PRIM1-006	566	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000546761.1	PRIM1-009	381	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000550224.1	PRIM1-004	1206	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000548173.1	PRIM1-005	590	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 566 bps,

Version

ENST00000552408.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000407282 (version 1)

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Transcript: ENST00000552408.1 PRIM1-006

Summary