Transcript: ENST00000375677.1 C20orf112-005

Description

chromosome 20 open reading frame 112 [Source:HGNC Symbol;Acc:16106]

Gene Synonyms

C20orf113, DKFZP566G1424, dJ1184F4.2, dJ1184F4.4

Location

Chromosome 20: 31,052,583-31,099,210 reverse strand.

About this transcript

This transcript has 3 exons, is annotated with 2 domains and features, is associated with 22101 variant alleles and maps to 203 oligo probes.

Gene

This transcript is a product of gene ENSG00000197183.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000359676.5	C20orf112-001	5991	436aa	ENSP00000352704.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13202	Q96MY1	NM_080616.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000375678.3	C20orf112-009	2042	155aa	ENSP00000364830.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5JYC0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000201961.2	C20orf112-002	971	175aa	ENSP00000201961.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5W149	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000326071.4	C20orf112-003	701	91aa	ENSP00000317413.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5JYB6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000375677.1	C20orf112-005	541	113aa	ENSP00000364829.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5JYB6 Q5JYC2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000419612.1	C20orf112-007	311	76aa	ENSP00000410774.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000475781.1	C20orf112-006	1127	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000485364.1	C20orf112-004	885	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000470428.1	C20orf112-008	307	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 541 bps, Translation length: 113 residues

Version

ENST00000375677.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000078632 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000375677.1 C20orf112-005

Summary