Transcript: ENST00000577724.1 PSMD12-009

Description

proteasome (prosome, macropain) 26S subunit, non-ATPase, 12 [Source:HGNC Symbol;Acc:9557]

Gene Synonyms

Rpn5, p55

Location

Chromosome 17: 65,337,091-65,338,600 reverse strand.

About this transcript

This transcript has 2 exons, is associated with 616 variant alleles and maps to 141 oligo probes.

Gene

This transcript is a product of gene ENSG00000197170.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000356126.3	PSMD12-001	4406	456aa	ENSP00000348442.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11669	O00232	NM_002816.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000357146.4	PSMD12-002	2437	436aa	ENSP00000349667.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11670	O00232	NM_174871.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000584008.1	PSMD12-003	1752	42aa	ENSP00000462525.1	Nonsense mediated decay		J3KSK1	-	-
ENST00000579365.1	PSMD12-007	560	38aa	ENSP00000463017.1	Nonsense mediated decay		J3KTJ5	-	-
ENST00000581618.1	PSMD12-006	613	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000584289.1	PSMD12-004	1090	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000578015.1	PSMD12-008	448	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000577724.1	PSMD12-009	377	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 377 bps,

Version

ENST00000577724.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000447163 (version 1)

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Transcript: ENST00000577724.1 PSMD12-009

Summary