Transcript: ENST00000587082.1 ZNF420-007

Description

zinc finger protein 420 [Source:HGNC Symbol;Acc:20649]

Gene Synonyms

APAK, FLJ32191

Location

Chromosome 19: 37,569,335-37,602,589 forward strand.

About this transcript

This transcript has 6 exons, is annotated with 5 domains and features, is associated with 12801 variant alleles and maps to 100 oligo probes.

Gene

This transcript is a product of gene ENSG00000197050.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000337995.3	ZNF420-001	3535	688aa	ENSP00000338770.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS12498	K7ELF6 K7EQC9 K7ERS3 Q8TAQ5	NM_144689.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000304239.7	ZNF420-002	1945	536aa	ENSP00000306102.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7ELF6 K7EQC9 K7ERS3 Q96ML5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000589245.1	ZNF420-005	695	163aa	ENSP00000467772.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7ELF6 K7EQC9 K7ERS3	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000587029.1	ZNF420-008	612	88aa	ENSP00000466057.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7ELF6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000590332.1	ZNF420-009	541	79aa	ENSP00000468387.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7ERS3	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000585862.1	ZNF420-004	403	89aa	ENSP00000468736.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000587082.1	ZNF420-007	571	47aa	ENSP00000467369.1	Nonsense mediated decay		K7EPG0	-	-
ENST00000589461.1	ZNF420-006	537	51aa	ENSP00000465346.1	Nonsense mediated decay		K7EJW2	-	-
ENST00000586540.1	ZNF420-003	465	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 3, Transcript length: 571 bps, Translation length: 47 residues

Version

ENST00000587082.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000457640 (version 1)

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Transcript: ENST00000587082.1 ZNF420-007

Summary