Transcript: ENST00000466154.1 SLX4-003

Description

SLX4 structure-specific endonuclease subunit [Source:HGNC Symbol;Acc:23845]

Gene Synonyms

BTBD12, FANCP, KIAA1784, KIAA1987, MUS312

Location

About this transcript

This transcript has 7 exons, is associated with 7876 variant alleles and maps to 274 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000294008.3	SLX4-001	7307	1834aa	ENSP00000294008.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10506	Q8IY92	NM_032444.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000466154.1	SLX4-003	3228	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000486524.1	SLX4-002	3075	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 7, Coding exons: 0, Transcript length: 3,228 bps,

Version

ENST00000466154.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000157303 (version 1)

Annotation Attributes

retained intron CDS [Definitions]