Transcript: ENST00000399397.1 OTOG-002

Description

otogelin [Source:HGNC Symbol;Acc:8516]

Gene Synonyms

DFNB18B, FLJ46346, MLEMP, OTGN, mlemp

Location

Chromosome 11: 17,569,375-17,668,697 forward strand.

About this transcript

This transcript has 55 exons, is annotated with 50 domains and features, is associated with 47672 variant alleles and maps to 1490 oligo probes.

Gene

This transcript is a product of gene ENSG00000188162.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000399391.2	OTOG-201	8778	2925aa	ENSP00000382323.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS59225	H9KVB3 Q6ZRI0	NM_001277269.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000399397.1	OTOG-002	9953	2852aa	ENSP00000382329.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H9KVB3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000342528.2	OTOG-001	4992	1508aa	ENSP00000341666.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q6ZRI0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000428619.1	OTOG-004	282	93aa	ENSP00000399057.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9IZ84	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000498332.1	OTOG-003	2075	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000485669.1	OTOG-005	545	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 55, Coding exons: 54, Transcript length: 9,953 bps, Translation length: 2,852 residues

Version

ENST00000399397.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000313844 (version 1)

Annotation Attributes

dotter confirmed [Definitions]

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000399397.1 OTOG-002

Summary