Transcript: ENST00000447516.1 WBSCR17-004

Description

Williams-Beuren syndrome chromosome region 17 [Source:HGNC Symbol;Acc:16347]

Gene Synonyms

GALNACT17, GALNT16, GALNT20, GALNTL3, GalNAc-T17

Location

About this transcript

This transcript has 4 exons, is annotated with 5 domains and features, is associated with 52062 variant alleles and maps to 119 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000333538.5	WBSCR17-001	3884	598aa	ENSP00000329654.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5540	B3KRD2 Q2L4S5 Q68CW8 Q6IS24	NM_022479.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000447516.1	WBSCR17-004	566	188aa	ENSP00000392019.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H7BZX9	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000498380.2	WBSCR17-003	3653	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000467723.1	WBSCR17-002	3183	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 566 bps, Translation length: 188 residues

Incomplete CDS

5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete

Version

ENST00000447516.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000345152 (version 1)