Transcript: ENST00000434468.1 CACNB4-009

Description

calcium channel, voltage-dependent, beta 4 subunit [Source:HGNC Symbol;Acc:1404]

Gene Synonyms

CAB4, CACNLB4, EA5, EIG9, EJM, EJM4, EJM6

Location

Chromosome 2: 152,732,994-152,828,502 reverse strand.

About this transcript

This transcript has 5 exons, is annotated with 6 domains and features, is associated with 38255 variant alleles and maps to 120 oligo probes.

Gene

This transcript is a product of gene ENSG00000182389.14 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000539935.1	CACNB4-001	7974	520aa	ENSP00000438949.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS46426	O00305 Q53S65 Q580I4 Q9NZA2	NM_001145798.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000360283.6	CACNB4-201	8055	487aa	ENSP00000353425.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8WA06 Q580I4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000397327.2	CACNB4-002	2283	473aa	ENSP00000380490.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J224 E7EN11 Q53S65 Q580I4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000534999.1	CACNB4-003	2181	486aa	ENSP00000443893.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS46428	O00305 Q53S65 Q580I4	NM_001005747.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000439467.1	CACNB4-006	2053	515aa	ENSP00000390161.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0Y476 Q53S65 Q580I4	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000427385.1	CACNB4-005	1886	502aa	ENSP00000410978.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS46427	O00305 Q53S65 Q580I4	NM_001005746.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000201943.5	CACNB4-004	1394	458aa	ENSP00000201943.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS54409	O00305 Q53S65 Q9NZA2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000434468.1	CACNB4-009	583	108aa	ENSP00000399242.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J224	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000475848.1	CACNB4-008	584	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000470066.1	CACNB4-007	5374	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 4, Transcript length: 583 bps, Translation length: 108 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000434468.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000338432 (version 2)

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Transcript: ENST00000434468.1 CACNB4-009

Summary