Transcript: ENST00000470066.1 CACNB4-007

Description

calcium channel, voltage-dependent, beta 4 subunit [Source:HGNC Symbol;Acc:1404]

Gene Synonyms

CAB4, CACNLB4, EA5, EIG9, EJM, EJM4, EJM6

Location

Chromosome 2: 152,722,275-152,830,234 reverse strand.

About this transcript

This transcript has 7 exons, is associated with 43976 variant alleles and maps to 248 oligo probes.

Gene

This transcript is a product of gene ENSG00000182389.14 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000360283.6	CACNB4-201	8055	487aa	ENSP00000353425.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8WA06 Q580I4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000539935.1	CACNB4-001	7974	520aa	ENSP00000438949.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS46426	O00305 Q53S65 Q580I4 Q9NZA2	NM_001145798.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000397327.2	CACNB4-002	2283	473aa	ENSP00000380490.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J224 E7EN11 Q53S65 Q580I4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000534999.1	CACNB4-003	2181	486aa	ENSP00000443893.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS46428	O00305 Q53S65 Q580I4	NM_001005747.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000439467.1	CACNB4-006	2053	515aa	ENSP00000390161.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0Y476 Q53S65 Q580I4	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000427385.1	CACNB4-005	1886	502aa	ENSP00000410978.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS46427	O00305 Q53S65 Q580I4	NM_001005746.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000201943.5	CACNB4-004	1394	458aa	ENSP00000201943.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS54409	O00305 Q53S65 Q9NZA2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000434468.1	CACNB4-009	583	108aa	ENSP00000399242.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J224	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000475848.1	CACNB4-008	584	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000470066.1	CACNB4-007	5374	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 7, Coding exons: 0, Transcript length: 5,374 bps,

Version

ENST00000470066.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000338430 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000470066.1 CACNB4-007

Summary