Transcript: ENST00000596819.1 SLC25A42-005

Description

solute carrier family 25, member 42 [Source:HGNC Symbol;Acc:28380]

Gene Synonyms

MGC26694

Location

Chromosome 19: 19,216,672-19,221,455 forward strand.

About this transcript

This transcript has 3 exons, is associated with 2242 variant alleles and maps to 187 oligo probes.

Gene

This transcript is a product of gene ENSG00000181035.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000318596.7	SLC25A42-001	3120	318aa	ENSP00000326693.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS32966	Q86VD7	NM_178526.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000600275.1	SLC25A42-006	318	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000594070.1	SLC25A42-002	1228	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000596819.1	SLC25A42-005	753	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000597661.1	SLC25A42-003	519	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000600251.1	SLC25A42-004	414	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 753 bps,

Version

ENST00000596819.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000465936 (version 1)

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Transcript: ENST00000596819.1 SLC25A42-005

Summary