Transcript: ENST00000576444.1 HIC1-004

Description

hypermethylated in cancer 1 [Source:HGNC Symbol;Acc:4909]

Gene Synonyms

ZBTB29, ZNF901, hic-1

Location

Chromosome 17: 1,959,513-1,960,237 forward strand.

About this transcript

This transcript has 1 exon, is annotated with 7 domains and features, is associated with 431 variant alleles and maps to 136 oligo probes.

Gene

This transcript is a product of gene ENSG00000177374.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000322941.3	HIC1-005	3053	733aa	ENSP00000314080.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS42229	I3L388 K7ENQ1 O95459 Q14526	NM_001098202.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000399849.3	HIC1-006	3157	714aa	ENSP00000382742.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS42230	I3L388 K7ENQ1 O95459 Q14526	NM_006497.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000574370.1	HIC1-001	1134	9aa	ENSP00000461476.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000571875.2	HIC1-002	812	66aa	ENSP00000476554.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000576444.1	HIC1-004	725	84aa	ENSP00000467045.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7ENQ1	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000571990.1	HIC1-003	654	96aa	ENSP00000460268.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		I3L388 K7ENQ1	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 1, Coding exons: 1, Transcript length: 725 bps, Translation length: 84 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000576444.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000438471 (version 2)

Annotation Attributes

retained intron first [Definitions]

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Favourite species

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Recent locations

Transcript: ENST00000576444.1 HIC1-004

Summary