Transcript: ENST00000527348.1 BANF1-005

Description

barrier to autointegration factor 1 [Source:HGNC Symbol;Acc:17397]

Gene Synonyms

BAF, BCRG1, BCRP1, D14S1460, NGPS

Location

Chromosome 11: 65,770,253-65,771,369 forward strand.

About this transcript

This transcript has 3 exons, is annotated with 6 domains and features, is associated with 691 variant alleles and maps to 299 oligo probes.

Gene

This transcript is a product of gene ENSG00000175334.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000312175.2	BANF1-001	1155	89aa	ENSP00000310275.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8125	E9PJJ8 O75531	NM_003860.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000533166.1	BANF1-004	1135	89aa	ENSP00000433760.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8125	E9PJJ8 O75531	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000445560.2	BANF1-002	946	89aa	ENSP00000416128.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8125	E9PJJ8 O75531	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000527348.1	BANF1-005	670	89aa	ENSP00000432867.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8125	E9PJJ8 O75531	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000530204.1	BANF1-003	586	28aa	ENSP00000431785.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PJJ8	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000524628.1	BANF1-008	612	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000528648.1	BANF1-006	362	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000524663.1	BANF1-007	251	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 2, Transcript length: 670 bps, Translation length: 89 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O75531

CCDS

This transcript is a member of the Human CCDS set: CCDS8125

Version

ENST00000527348.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000391346 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000527348.1 BANF1-005

Summary