Transcript: ENST00000571484.1 CBX2-003

Description

chromobox homolog 2 [Source:HGNC Symbol;Acc:1552]

Gene Synonyms

CDCA6, M33, MGC10561, SRXY5

Location

About this transcript

This transcript has 3 exons, is associated with 1092 variant alleles and maps to 146 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000310942.4	CBX2-001	4644	532aa	ENSP00000308750.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS32757	Q14781	NM_005189.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000269399.5	CBX2-002	1061	211aa	ENSP00000269399.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11764	Q14781	NM_032647.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000571484.1	CBX2-003	567	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 567 bps,

Version

ENST00000571484.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000437041 (version 1)