Transcript: ENST00000512520.1 STOX2-003

Description

storkhead box 2 [Source:HGNC Symbol;Acc:25450]

Gene Synonyms

DKFZp762K222, KIAA1392

Location

Chromosome 4: 184,881,412-184,930,643 forward strand.

About this transcript

This transcript has 3 exons, is annotated with 3 domains and features, is associated with 20473 variant alleles and maps to 115 oligo probes.

Gene

This transcript is a product of gene ENSG00000173320.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000308497.4	STOX2-001	10458	926aa	ENSP00000311257.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47167	D6RDA5 Q9P2F5	NM_020225.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000438269.1	STOX2-201	4027	863aa	ENSP00000390127.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RDA5 Q9P2F5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000512520.1	STOX2-003	518	155aa	ENSP00000425388.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RDA5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000513034.1	STOX2-004	443	74aa	ENSP00000422118.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000506529.1	STOX2-002	1055	219aa	ENSP00000426209.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000511250.1	STOX2-005	496	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 2, Transcript length: 518 bps, Translation length: 155 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000512520.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000361436 (version 1)

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Transcript: ENST00000512520.1 STOX2-003

Summary