Transcript: ENST00000483084.1 SP3-005

Description

Sp3 transcription factor [Source:HGNC Symbol;Acc:11208]

Gene Synonyms

SPR-2, SPR2

Location

Chromosome 2: 174,820,802-174,828,107 reverse strand.

About this transcript

This transcript has 2 exons, is associated with 3929 variant alleles and maps to 81 oligo probes.

Gene

This transcript is a product of gene ENSG00000172845.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000310015.6	SP3-001	6359	781aa	ENSP00000310301.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2254	H0Y6K5 Q02447 Q68DP2	NM_003111.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000455789.2	SP3-201	6236	728aa	ENSP00000388903.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q02447 Q68DP2 Q8TE45	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000418194.2	SP3-003	3937	713aa	ENSP00000406140.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS46452	H0Y6K5 Q68DP2	NM_001017371.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000416195.1	SP3-002	3627	738aa	ENSP00000413665.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q68DP2 Q8TE45	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000483084.1	SP3-005	567	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000462904.1	SP3-007	535	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000490182.1	SP3-008	459	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000465379.1	SP3-004	5489	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 567 bps,

Version

ENST00000483084.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000334000 (version 1)

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Transcript: ENST00000483084.1 SP3-005

Summary