Transcript: ENST00000460790.1 CSDC2-003

Description

cold shock domain containing C2, RNA binding [Source:HGNC Symbol;Acc:30359]

Gene Synonyms

PIPPIN, PIPPin, dJ347H13.2

Location

About this transcript

This transcript has 3 exons, is annotated with 6 domains and features, is associated with 2896 variant alleles and maps to 112 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000306149.7	CSDC2-001	2777	153aa	ENSP00000302485.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS14019	Q9Y534	NM_014460.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000460790.1	CSDC2-003	721	151aa	ENSP00000417127.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H7C4E7	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 721 bps, Translation length: 151 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000460790.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000320691 (version 2)