Transcript: ENST00000454188.1 REG1B-005

Description

regenerating islet-derived 1 beta [Source:HGNC Symbol;Acc:9952]

Gene Synonyms

PSPS2, REGH, REGI-BETA, REGL

Location

About this transcript

This transcript has 4 exons, is annotated with 11 domains and features, is associated with 1268 variant alleles and maps to 290 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000305089.3	REG1B-001	767	166aa	ENSP00000303206.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1963	P48304 Q6ICS1	NM_006507.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000454188.1	REG1B-005	626	149aa	ENSP00000387410.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H7BZ24	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000479258.1	REG1B-003	1255	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000476554.1	REG1B-002	1225	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000469052.1	REG1B-004	579	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 626 bps, Translation length: 149 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000454188.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000328253 (version 1)