Transcript: ENST00000302450.6 CKAP2L-001

Description

cytoskeleton associated protein 2-like [Source:HGNC Symbol;Acc:26877]

Gene Synonyms

FLJ40629

Location

Chromosome 2: 113,494,184-113,522,254 reverse strand.

About this transcript

This transcript has 9 exons, is annotated with 8 domains and features, is associated with 12347 variant alleles and maps to 510 oligo probes.

Gene

This transcript is a product of gene ENSG00000169607.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000302450.6	CKAP2L-001	4533	745aa	ENSP00000305204.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2100	F5H0M5 Q8IYA6	NM_152515.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000541405.1	CKAP2L-201	4737	580aa	ENSP00000438763.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H0M5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000435431.1	CKAP2L-002	2455	188aa	ENSP00000414834.1	Nonsense mediated decay		F8WBE0	-	-
ENST00000481732.1	CKAP2L-005	557	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000497357.1	CKAP2L-004	551	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000461876.1	CKAP2L-003	431	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000474331.1	CKAP2L-006	801	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 9, Coding exons: 9, Transcript length: 4,533 bps, Translation length: 745 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8IYA6

CCDS

This transcript is a member of the Human CCDS set: CCDS2100

Version

ENST00000302450.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000254082 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000302450.6 CKAP2L-001

Summary