Transcript: ENST00000567821.1 COG7-004

Description

component of oligomeric golgi complex 7 [Source:HGNC Symbol;Acc:18622]

Gene Synonyms

CDG2E

Location

Chromosome 16: 23,409,367-23,428,614 reverse strand.

About this transcript

This transcript has 6 exons, is associated with 8101 variant alleles and maps to 129 oligo probes.

Gene

This transcript is a product of gene ENSG00000168434.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000307149.5	COG7-001	2926	770aa	ENSP00000305442.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10610	P83436	NM_153603.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000563164.1	COG7-005	741	113aa	ENSP00000460151.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000561854.1	COG7-003	814	88aa	ENSP00000459872.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000569635.1	COG7-007	474	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000566364.1	COG7-006	939	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000567821.1	COG7-004	922	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 0, Transcript length: 922 bps,

Version

ENST00000567821.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000434822 (version 1)

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Transcript: ENST00000567821.1 COG7-004

Summary