Transcript: ENST00000562148.1 PRRT2-008

Description

proline-rich transmembrane protein 2 [Source:HGNC Symbol;Acc:30500]

Gene Synonyms

BFIC2, BFIS2, DKFZp547J199, DSPB3, DYT10, EKD1, FLJ25513, ICCA, IFITMD1, PKC

Location

Chromosome 16: 29,823,177-29,824,651 forward strand.

About this transcript

This transcript has 2 exons, is associated with 889 variant alleles and maps to 108 oligo probes.

Gene

This transcript is a product of gene ENSG00000167371.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000567659.1	PRRT2-003	1470	394aa	ENSP00000456226.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS58445	H3BN10 Q7Z6L0	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000300797.6	PRRT2-002	3000	299aa	ENSP00000300797.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS58446	H3BN10 Q7Z6L0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000358758.7	PRRT2-001	2548	340aa	ENSP00000351608.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10654	H3BN10 Q7Z6L0	NM_145239.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000572820.1	PRRT2-009	576	135aa	ENSP00000458291.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		I3L0R5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000562148.1	PRRT2-008	522	92aa	ENSP00000454634.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BN10	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000567551.1	PRRT2-005	563	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 1, Transcript length: 522 bps, Translation length: 92 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000562148.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000435559 (version 19)

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Recent locations

Transcript: ENST00000562148.1 PRRT2-008

Summary